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BasinHoppingSaddleSearch.h
Go to the documentation of this file.
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/*
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** This file is part of eOn.
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**
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** SPDX-License-Identifier: BSD-3-Clause
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**
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** Copyright (c) 2010--present, eOn Development Team
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** All rights reserved.
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**
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** Repo:
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** https://github.com/TheochemUI/eOn
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*/
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#pragma once
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#include "
Eigen.h
"
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#include "
EonLogger.h
"
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#include "
Matter.h
"
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#include "
MinModeSaddleSearch.h
"
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#include "
SaddleSearchMethod.h
"
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#include <vector>
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namespace
eonc
{
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class
BasinHoppingSaddleSearch
:
public
SaddleSearchMethod
{
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public
:
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BasinHoppingSaddleSearch
(std::shared_ptr<Matter>
reactant
,
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std::shared_ptr<Matter> displacement,
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std::shared_ptr<Potential> potPassed,
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const
Parameters
¶metersPassed)
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:
SaddleSearchMethod
(potPassed, parametersPassed),
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reactant
{std::make_shared<
Matter
>(*
reactant
)},
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saddle
{displacement} {
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eigenvector
.resize(
reactant
->numberOfAtoms(), 3);
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eigenvector
.setZero();
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}
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~BasinHoppingSaddleSearch
() =
default
;
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int
run
(
void
);
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double
getEigenvalue
();
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AtomMatrix
getEigenvector
();
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std::string_view
describeStatus
(
int
status
)
const override
{
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return
MinModeSaddleSearch::statusMessage
(
status
);
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}
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int
getStatus
()
const override
{
return
status
; }
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double
eigenvalue
{0.0};
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AtomMatrix
eigenvector
;
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std::shared_ptr<Matter>
reactant
;
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std::shared_ptr<Matter>
saddle
;
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std::shared_ptr<Matter>
product
;
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int
status
{0};
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private
:
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eonc::log::Scoped
log
;
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};
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}
// namespace eonc
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using
eonc::BasinHoppingSaddleSearch
;
Eigen.h
AtomMatrix
Eigen::Matrix< double, Eigen::Dynamic, 3, eOnStorageOrder > AtomMatrix
Definition
Eigen.h:37
EonLogger.h
Matter.h
MinModeSaddleSearch.h
SaddleSearchMethod.h
BasinHoppingSaddleSearch::BasinHoppingSaddleSearch
BasinHoppingSaddleSearch(std::shared_ptr< Matter > reactant, std::shared_ptr< Matter > displacement, std::shared_ptr< Potential > potPassed, const Parameters ¶metersPassed)
Definition
BasinHoppingSaddleSearch.h:24
eonc::BasinHoppingSaddleSearch
Definition
BasinHoppingSaddleSearch.h:22
eonc::BasinHoppingSaddleSearch::BasinHoppingSaddleSearch
BasinHoppingSaddleSearch(std::shared_ptr< Matter > reactant, std::shared_ptr< Matter > displacement, std::shared_ptr< Potential > potPassed, const Parameters ¶metersPassed)
Definition
BasinHoppingSaddleSearch.h:24
eonc::BasinHoppingSaddleSearch::product
std::shared_ptr< Matter > product
Definition
BasinHoppingSaddleSearch.h:49
eonc::BasinHoppingSaddleSearch::describeStatus
std::string_view describeStatus(int status) const override
Definition
BasinHoppingSaddleSearch.h:39
eonc::BasinHoppingSaddleSearch::run
int run(void)
Definition
BasinHoppingSaddleSearch.cpp:22
eonc::BasinHoppingSaddleSearch::status
int status
Definition
BasinHoppingSaddleSearch.h:51
eonc::BasinHoppingSaddleSearch::getStatus
int getStatus() const override
Definition
BasinHoppingSaddleSearch.h:42
eonc::BasinHoppingSaddleSearch::log
eonc::log::Scoped log
Definition
BasinHoppingSaddleSearch.h:54
eonc::BasinHoppingSaddleSearch::getEigenvector
AtomMatrix getEigenvector()
Definition
BasinHoppingSaddleSearch.cpp:84
eonc::BasinHoppingSaddleSearch::reactant
std::shared_ptr< Matter > reactant
Definition
BasinHoppingSaddleSearch.h:47
eonc::BasinHoppingSaddleSearch::getEigenvalue
double getEigenvalue()
Definition
BasinHoppingSaddleSearch.cpp:82
eonc::BasinHoppingSaddleSearch::eigenvector
AtomMatrix eigenvector
Definition
BasinHoppingSaddleSearch.h:45
eonc::BasinHoppingSaddleSearch::eigenvalue
double eigenvalue
Definition
BasinHoppingSaddleSearch.h:44
eonc::BasinHoppingSaddleSearch::~BasinHoppingSaddleSearch
~BasinHoppingSaddleSearch()=default
eonc::BasinHoppingSaddleSearch::saddle
std::shared_ptr< Matter > saddle
Definition
BasinHoppingSaddleSearch.h:48
eonc::Matter
Definition
Matter.h:92
eonc::MinModeSaddleSearch::statusMessage
static constexpr std::string_view statusMessage(int status)
Human-readable message for a status code.
Definition
MinModeSaddleSearch.h:56
eonc::Parameters
Definition
Parameters.h:28
eonc::SaddleSearchMethod::SaddleSearchMethod
SaddleSearchMethod(std::shared_ptr< Potential > potPassed, const Parameters ¶msPassed)
Definition
SaddleSearchMethod.h:27
eonc
RAII resource manager for the ARTn C library with global synchronization.
Definition
ARTnSaddleSearch.cpp:19
eonc::log::Scoped
RAII helper for class-scoped logging.
Definition
EonLogger.h:171
include
eon
BasinHoppingSaddleSearch.h
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