eOn 3.2.0
Long-timescale dynamics: aKMC, NEB, parallel replica
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DynamicsJob.cpp
Go to the documentation of this file.
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/*
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** This file is part of eOn.
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**
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** SPDX-License-Identifier: BSD-3-Clause
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**
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** Copyright (c) 2010--present, eOn Development Team
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** All rights reserved.
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**
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** Repo:
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** https://github.com/TheochemUI/eOn
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*/
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#include <stdexcept>
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#include <string>
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#include "
eon/BaseStructures.h
"
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#include "
eon/Dynamics.h
"
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#include "
eon/DynamicsJob.h
"
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#include "
eon/EonLogger.h
"
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#include "
eon/HelperFunctions.h
"
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#include "
eon/JobResult.h
"
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#include "
eon/Parameters.h
"
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#include "
eon/PotRegistry.h
"
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#include "
eon/Potential.h
"
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namespace
eonc
{
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std::vector<std::string>
DynamicsJob::run
(
void
) {
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auto
R = std::make_shared<Matter>(
pot
,
params
);
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const
std::string posFile =
eonc::helpers::getRelevantFile
(
"pos.con"
);
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if
(!
eonc::io::io_ok
(R->con2matter(posFile))) {
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EONC_LOG_CRITICAL
(
"Failed to load {}"
, posFile);
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throw
std::runtime_error(
"failed to load "
+ posFile);
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}
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auto
d = std::make_unique<Dynamics>(R.get(),
params
);
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d->run();
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std::string productFilename(
"final.con"
);
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if
(!
eonc::io::io_ok
(R->matter2con(productFilename))) {
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EONC_LOG_ERROR
(
"Failed to write {}"
, productFilename);
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}
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const
std::string resultsFilename(
"results.dat"
);
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auto
env =
JobResultEnvelope::fromMinimization
(
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RunStatus::GOOD
,
params
.potential_options().potential,
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PotRegistry::get
().total_force_calls(),
true
, R->getPotentialEnergy());
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env.job_type =
"dynamics"
;
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env.writeResultsDat(resultsFilename);
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std::vector<std::string> returnFiles;
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returnFiles.push_back(productFilename);
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returnFiles.push_back(resultsFilename);
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return
returnFiles;
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}
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}
// namespace eonc
BaseStructures.h
DynamicsJob.h
Dynamics.h
EonLogger.h
EONC_LOG_ERROR
#define EONC_LOG_ERROR(...)
Definition
EonLogger.h:261
EONC_LOG_CRITICAL
#define EONC_LOG_CRITICAL(...)
Definition
EonLogger.h:267
HelperFunctions.h
JobResult.h
Parameters.h
PotRegistry.h
Potential.h
eonc::DynamicsJob::run
std::vector< std::string > run(void) override
Virtual run; used solely for dynamic dispatch.
Definition
DynamicsJob.cpp:27
eonc::Job::pot
std::shared_ptr< Potential > pot
Definition
Job.h:63
eonc::Job::params
Parameters params
Definition
Job.h:58
eonc::PotRegistry::get
static PotRegistry & get() noexcept
Process-lifetime singleton.
Definition
PotRegistry.cpp:50
eonc::helpers::getRelevantFile
std::string getRelevantFile(std::string filename)
Definition
HelperFunctions.cpp:122
eonc::io::io_ok
constexpr bool io_ok(IoStatus s) noexcept
Definition
ConFileIO.h:38
eonc
RAII resource manager for the ARTn C library with global synchronization.
Definition
ARTnSaddleSearch.cpp:23
eonc::RunStatus::GOOD
@ GOOD
Definition
BaseStructures.h:117
eonc::JobResultEnvelope::fromMinimization
static JobResultEnvelope fromMinimization(RunStatus status, PotType pot, std::uint64_t fcalls, bool hasE, double energy)
Definition
JobResult.h:101
client
DynamicsJob.cpp
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