forcefields::PotentialBase Member List

This is the complete list of members for forcefields::PotentialBase, including all inherited members.

addForces(ChargeGroup< N, R, F > const &g1, ChargeGroup< N, R, F > &g2)	forcefields::PotentialBase	protected
applyPeriodicity0(double r, double const period)	forcefields::PotentialBase	static
applyPeriodicity0(double r[], double const periods[])	forcefields::PotentialBase	static
applyPeriodicity1(double r, int const axis)	forcefields::PotentialBase	protected
applyPeriodicity1(double r[])	forcefields::PotentialBase	protected
calculateCentre(double const r1[], double const r2[], double rc[])	forcefields::PotentialBase	protected
calculateCentre(double const r1[], double const r2[], double const r3[], double rc[])	forcefields::PotentialBase	protected
calculateWeightedCentre(double const w1, double const w2, double const w3, double const r1[], double const r2[], double const r3[], double rc[])	forcefields::PotentialBase	protected
computePt(int const nAtoms, double positions[], double forces[], double &energy, double const periods[], bool const fixed[])	forcefields::PotentialBase	protected
coulomb(const double r1[], const double r2[], double f1[], double f2[], double &u, double const qq)	forcefields::PotentialBase	protected
coulomb(double distance, double &force, double &energy, double const qq)	forcefields::PotentialBase	protected
coulombWithCutoff(const double r1[], const double r2[], double f1[], double f2[], double &u, double const qq)	forcefields::PotentialBase	protected
crossProduct(const double v[], const double w[], double e[])	forcefields::PotentialBase	inlineprotectedstatic
cutoff_	forcefields::PotentialBase	protected
distance(const double x[], const double y[], double z[], double &z1, double &z2)	forcefields::PotentialBase	protected
distance(const double x[], const double y[], double z[], double &z1)	forcefields::PotentialBase	protected
distance(const double x[], const double y[], double z[])	forcefields::PotentialBase	protected
distance(const double x[], const double y[], double &z1)	forcefields::PotentialBase	protected
distance(const double x[], const double y[], Vector3 &z)	forcefields::PotentialBase	protected
divide(double v[], double const divisor)	forcefields::PotentialBase	inlineprotectedstatic
dotProduct(double const v[], double const w[])	forcefields::PotentialBase	inlineprotectedstatic
epsilon(double const A, double const B)	forcefields::PotentialBase	protectedstatic
EPSILON_PT	forcefields::PotentialBase	protectedstatic
getCutoff() const	forcefields::PotentialBase
getSwitchingWidth() const	forcefields::PotentialBase
isoscelesBase(double length, double angle)	forcefields::PotentialBase	protectedstatic
lennardJones(double const distance, double &force, double &energy, double const epsilon, double const sigma)	forcefields::PotentialBase	protected
lennardJones(const double R1[], const double R2[], double F1[], double F2[], double &E, double const epsilon, double const sigma)	forcefields::PotentialBase	protected
lennardJonesWithCutoff(double const r1[], double const r2[], double f1[], double f2[], double &energy, double const epsilon, double const sigma)	forcefields::PotentialBase	protected
multiply(double v[], double const factor)	forcefields::PotentialBase	inlineprotectedstatic
norm(double const v[])	forcefields::PotentialBase	inlineprotectedstatic
normalise(double v[])	forcefields::PotentialBase	inlineprotectedstatic
ONE_OVER_4_PI_EPSILON0	forcefields::PotentialBase	protectedstatic
periods_	forcefields::PotentialBase	protected
PotentialBase()	forcefields::PotentialBase
PotentialBase(double cutoff, double switchingWidth)	forcefields::PotentialBase
restrainAngle(double const r1[], double const r2[], double const r3[], double f1[], double f2[], double f3[], double &u, const double k, const double aeq)	forcefields::PotentialBase	protected
restrainLength(const double R1[], const double R2[], double F1[], double F2[], double &u, const double k, const double r0)	forcefields::PotentialBase	protected
setCutoff(double cutoff)	forcefields::PotentialBase
setPeriodicity(const double periods[])	forcefields::PotentialBase	protected
setSwitchingWidth(double width)	forcefields::PotentialBase
sigma(double const A, double const B)	forcefields::PotentialBase	protectedstatic
SIGMA_PT	forcefields::PotentialBase	protectedstatic
smithKongEpsilon(double sigma1, double epsilon1, double sigma2, double epsilon2)	forcefields::PotentialBase	protectedstatic
smithKongSigma(double sigma1, double epsilon1, double sigma2, double epsilon2)	forcefields::PotentialBase	protectedstatic
spreadForce(double f1[], double f2[], double const fc[])	forcefields::PotentialBase	protected
spreadForce(double f1[], double f2[], double f3[], double const fc[])	forcefields::PotentialBase	protected
spreadWeightedForce(double const w1, double const w2, double const w3, double f1[], double f2[], double f3[], double const fc[])	forcefields::PotentialBase	protected
switching(ChargeGroup< N, R, F > &g1, ChargeGroup< N, R, F > &g2, double &energy, double cutoff, double switchingWidth)	forcefields::PotentialBase	protected
switching(double const distance, double &force, double &energy)	forcefields::PotentialBase	protected
switching(double const r1[], double const r2[], double f1[], double f2[], double &energy)	forcefields::PotentialBase	protected
switchingWidth_	forcefields::PotentialBase	protected
unBreak0(double const r, double const ref, double const period)	forcefields::PotentialBase	protectedstatic
unBreak0(double r[], double const ref[], double const periods[])	forcefields::PotentialBase	protectedstatic
unBreak1(double const r, double const ref, int const axis)	forcefields::PotentialBase	protected
unBreak1(double r[], double const ref[])	forcefields::PotentialBase	protected
~PotentialBase()	forcefields::PotentialBase	inlinevirtual